FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1509742
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAGAT6300.009165718.7155871
CAGATCT9454.6078727E-47.96653033
GTAAGAT7950.0070508867.74789438
CAAAAAT24702.6648195E-96.6690111
GGGGGGG2500.0088058596.02289630-34
CTCCAGA13750.00345470135.98998451
ATTGAAT14500.0062329315.6801581
ATCGAAA17450.00139868185.5065521
CAAATAT17500.00145019035.49081951
TTGAATT16750.0053329715.31332452
GTTGAAA19550.00101833785.26613141
CATCGGT17350.0078148115.14269831
AATCTGC20250.00168868975.069615
Produced by FastQC (version 0.11.5)