FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1013006
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGAA5950.00387198979.6779661
CCCCCCC2352.2510594E-58.325515135-139
CTTCGAT10050.0045046187.16217571
CCCAGAT10550.00721513346.82273631
CTTTCAT15401.5257632E-46.54362441
AGAATAC12050.00377050676.5334795
CTCATCA17301.0163786E-46.24102931
CTTCCAT18452.4524308E-45.85202171
TTTATCA19400.00312435985.16493947
Produced by FastQC (version 0.11.5)