FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences627139
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCAGAC3355.642412E-415.132341
CTACAAC4957.9442264E-411.7040911
CGATCTT6658.6201436E-49.7674514
CTTCAAC6900.00117106369.4459651
CCCTGCT8300.0062409257.85266921
CTTTCAT9650.0028517897.50456571
Produced by FastQC (version 0.11.5)