FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2859242
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCTT21254.230292E-55.78810261
AATCTCG15550.0079322085.5578955
CTAAAAT29151.1204938E-65.46047351
GTTTAAT21603.3045298E-45.35935451
CTTTAAT38205.6917997E-85.1138341
Produced by FastQC (version 0.11.5)