FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007430

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007430
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences728221
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAGAA18601.5219484E-87.65265041
CGAAGAT8450.0085641887.58019831
AGGATGT8550.009869197.46067863
CTTTTAT12250.00474454286.39074331
CTGAAAG14900.00562786125.73178341
Produced by FastQC (version 0.11.5)