FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007436

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007436
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences759625
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCAATT5500.002108496410.41371252
GATCCAG6300.00648540779.0901385
ATTACTA6550.0089135578.7443392
GTCAGAA7600.0030259728.5102031
AGAGAAT12350.0048610996.37597853
CAACAAA13900.00232760526.2040811
CTTTTCT19700.0035915825.10708241
Produced by FastQC (version 0.11.5)