FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences839703
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGGG4600.00683733410.8587828
CGCCAGG5650.00262322910.1436131
CTTCGAT7900.004415918.1614351
CAAACAG12900.00758691466.10877471
TTGCCGT20302.5856292E-55.97576869
GGATGCC13150.0096367435.96908576
Produced by FastQC (version 0.11.5)