FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1181567
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCCGG10700.00107829947.3568888
CCTGTAT12350.00464442056.40461061
CTGATAG13000.0079143386.08437971
CTTTTCT30354.723188E-75.4492421
CTTCAAT20258.740266E-45.3263931
Produced by FastQC (version 0.11.5)