FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences537870
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2001.3031582E-524.7207857
ACACGTC1751.4989705E-424.2140258
CACGTCT2258.185133E-418.8331329
GCACACG3050.006234347413.8945876
CTCTGAT4550.006606688310.9078581
CTTCCAC7653.1388E-510.1949251
TTCCACA7900.00500259278.0480442
Produced by FastQC (version 0.11.5)