FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences563659
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTAGAC1000.00735181827.8863476
GATTCAC2952.8634962E-416.542755
CAAATAA8200.00770210947.67011261
CTTTGAT8250.008132337.6236271
Produced by FastQC (version 0.11.5)