FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences542049
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACAGTC3153.7301006E-415.9783783
GATTACC5056.9507005E-512.8143446
CCCGAAT4000.001987642612.8087021
ATCCAAA5500.002032838310.4585746
CTTTTAC7500.0022709088.7831111
ATCAAAT8450.00665894767.79566051
CATCAAT9600.00244078957.6242281
Produced by FastQC (version 0.11.5)