FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1962974
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACAT11800.00305301746.6671761
CTTGAAT20502.9122048E-55.9309781
CACAGCT16050.00191815995.79294731
CTCAATT14950.0055440435.74078461
CTTGAAG26801.7082784E-65.6042271
CAACGAT16650.00296759375.58419231
TATTGGT20800.00141828445.1369787
CTTTGAC21050.00157536545.0964811
Produced by FastQC (version 0.11.5)