FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences968510
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGAA5702.0486591E-411.4140661
TTAAGGC4800.00884156110.4893667
GGTTTAC5900.00348511769.8019091
CCCTCTT6650.009656738.6595882
GATCTTG9352.4030883E-48.4620095
CTCCTGT9150.0017233727.90044641
TTATATA18350.0086889785.09565164
Produced by FastQC (version 0.11.5)