FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1623463
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCATGT9450.00252989147.59847741
CGAATCC11150.00180281797.0090443
GTCAGGG10500.00705995556.83862971
GTTTATT12000.00349159036.5821811
CAACAAT22406.145354E-45.1289721
Produced by FastQC (version 0.11.5)