FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1366377
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCCGAA8650.00679636239.038969145
GGTAGAT8508.458708E-48.4904431
CTCAAGG12200.003936416.50702051
CAACAAT18652.743343E-45.80445861
GTTTTAT20409.1924914E-45.3065271
Produced by FastQC (version 0.11.5)