FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1196633
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCC3300.00915078513.1131469
CTCGGAA6200.00513155349.35339451
TACAATG12758.4111467E-46.78968433
AGATTAA12450.0048965056.3722526
CTTGAAT13850.00203085976.28061871
CTTTGAA21653.3164874E-45.357141
CTTTAAT24405.7522702E-55.3475351
Produced by FastQC (version 0.11.5)