FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1776276
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAACGT4250.003923405411.7002423
TCCCTAC5400.001939652610.5201769
CCCACGT4750.00885415110.4881311
TTCCCTA8156.542136E-48.7130298
TAGGTTT8350.0078402517.6567023
CTCCAAC15151.431162E-46.57671551
CACTCTT13300.00161568836.40991162
CTTCCGA17408.516863E-45.72627831
ACTCTTT21203.2843382E-45.36129673
CCTCGCC19350.00325046275.14921141
TTTCCCT22658.40059E-45.0162437
Produced by FastQC (version 0.11.5)