FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2183692
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCAAT9650.0027803067.5259071
TTAGAAG12950.00722017656.13909862
TCTTGAC18151.8727627E-45.9699077
CCCACGG19153.6102813E-45.6886431
CCCAGCT28301.9993258E-55.1325091
CCCGTTT20150.0041853635.0459061
ACAATTT22957.9550955E-45.03593643
Produced by FastQC (version 0.11.5)