FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences755289
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGTCG400.007747491418.194378120-124
GACAAGT4300.003847652811.729387
GTGAATT5200.001243099211.0951912
CTCCAAA6405.5867154E-410.2400891
CCTCCAT8801.08804976E-49.1023031
CTGCATG8400.00727511857.71984629
Produced by FastQC (version 0.11.5)