FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences906171
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGGG2000.00789998418.131171
CTCCAAG6150.0047789299.4341051
CTCATTC7200.00170540729.0655851
CTCATTT8300.0061652457.86412241
CTTTGAT13854.0643517E-67.8546591
CTTTGAA13451.9013089E-47.0098211
CAAAAAC14300.00288872686.08598761
CAAAAAT19600.00300904785.18033461
Produced by FastQC (version 0.11.5)