FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences677771
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACCC3350.00976010512.9845371
CTTCAAG7900.00396471568.2591511
TCGGTTT8000.00461859958.1204133
TTCACTT9803.8360606E-48.1019995
CTTTGAT11450.00192342976.9647771
CTTTAAA11650.002308756.84520961
Produced by FastQC (version 0.11.5)