FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1235345
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAATAA8450.0074978777.69464833
ATTGTGA10000.00415689647.2217886
CACCGAT14755.791947E-46.39889531
GGAATTC13800.00202563856.28210453
CTTCAAA22651.0531931E-45.449221
CTTCAAT18950.00194695045.36379861
Produced by FastQC (version 0.11.5)