FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1086883
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCGT2500.001514167617.1855831
CTAAACA3650.001177392813.7327721
GTAAGGA8750.0012176888.1836111
CAACAAC13150.0012987186.53444241
TTCGATA12050.00385451186.5198312
CTATCAG12700.00648686856.20214651
GCCTGCT14150.00296205356.07264471
CCGGAAT21254.9370472E-55.72852751
CTTTCAT19300.00291161775.1942611
ATTTAAT17950.0070802465.1859931
GTTTTAT19600.00352991025.11475661
Produced by FastQC (version 0.11.5)