FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007592

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007592
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3422867
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAA16607.627739E-56.37378171
GTACGGA17350.00568279675.28515671
CTGAGAT18850.00262252435.23878571
CCCAAAA28002.7567232E-55.03832241
Produced by FastQC (version 0.11.5)