FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1362649
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGTG8851.2198533E-49.0085311
CACAGAA14457.49625E-67.52363871
CTCAAAC9850.00346409867.35814481
CGGAGTT11900.00303137956.671359
GTTTGAT16202.6936384E-46.26350741
CTTTGGA19350.00258680155.24386641
AATTGAA20850.00122913175.19222165
Produced by FastQC (version 0.11.5)