FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437962
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACCA3250.00802146113.3745111
CGAGGAT4604.4938852E-412.5229423
GTTTCAA5400.00163785610.7326331
GAAAGAT6759.533203E-49.6593691
ATTAACT1750.0065607197.810739140-144
Produced by FastQC (version 0.11.5)