FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences763651
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGCCT2750.002769632515.6997831
GTCATAA7550.0063085479.12036145
AGTTTCC7854.158988E-49.1161256
CTCAAAA10751.2853823E-58.70181751
CAAACCG8000.00475103278.0952011
CTTTGAT13703.8888375E-67.8785411
CCCCCCC2005.233438E-47.8733220-24
ACAGTAT8250.00658147977.8067183
CAAAGAT12650.00591267046.25715971
CATAAAA15100.0057757655.7184641
Produced by FastQC (version 0.11.5)