FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946452
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAATTGA6100.0059108159.1937454
CCCTGAT6900.00152779219.1757721
ATCAACC7800.00472420138.100712
CTCTCTT7950.0055061427.96387771
CCTTGAA12851.904578E-57.66432861
CCTTGAT13904.1286004E-46.5792711
CTTGAAG14100.00354877325.97499132
CATCAAC15500.00153816285.900121
CTTGAAA16900.00429565555.41135261
Produced by FastQC (version 0.11.5)