FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1050713
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGCC7700.00315448048.4717761
CTCCAAT9300.00197080347.79363061
TTTACGC8500.0079952657.63937337
CTTGGAA12003.9856613E-47.24807551
GATTCAG10050.00440286757.17906865
CCCGGAT10700.0077344996.7739031
CCCGAAG11950.00302725476.6718691
CTTTGAT19007.324863E-66.4851211
GGCAAAT16400.00211304055.74542571
TTGATTT27206.306984E-55.0401043
Produced by FastQC (version 0.11.5)