FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1673219
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCACAC10209.075468E-58.2377735
GTTCAAA17001.6411626E-56.5939631
CTTGAAC13400.00205609746.27410651
CTACGAT12950.0099551335.95111561
CAAAAAT33851.202352E-95.7952851
CCGCAGT17208.976389E-45.7026281
GGTATAT17200.00555116365.2952971
CTTTGTT20900.001882375.02829071
Produced by FastQC (version 0.11.5)