FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences574269
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTCGGT2000.00846204517.9148831
CTTAAAT5300.001536180810.8165331
CCCGGCT6659.197787E-49.6982821
CTGGAAT6350.0068570779.0279721
CCAGAAT7250.00202336378.8956661
CAAAAAG12650.00616669386.23126361
CAAAAAT13050.0085148996.0402671
Produced by FastQC (version 0.11.5)