FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007633

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007633
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences553332
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1852.009892E-423.188947
CACGTCT2104.7345497E-420.4283529
ACACGTC2257.535086E-419.0664638
AGCACAC3053.0431736E-416.4111425
GCACACG2700.002556068115.8887196
CAAATTT7201.7558635E-49.9322433
AAATTTA7954.360664E-59.8947644
CAATCTT9400.00249375387.6076764
ATTTATT11753.650928E-47.30204966
AATTTAT9800.00375211827.29649935
Produced by FastQC (version 0.11.5)