FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1354615
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC5059.843903E-411.4102798
CACGTCT5700.00270027410.1091089
AGAGCAC7904.1646446E-49.1160463
CCCGCCT10156.0212464E-58.5319331
GCACACG7650.003149928.4734986
CTCCCAT10550.0070408746.8403731
CTTCCGT16700.00276232055.61770731
CTTCCTT25051.6066848E-55.47366331
CTTCCAA20258.332435E-45.3456251
CTTTGAA24958.781717E-55.206361
Produced by FastQC (version 0.11.5)