FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509575
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT1701.1193826E-425.2778979
ACACGTC2359.976635E-418.2861398
CACACGT2050.00978424717.4684647
AGCACAC2850.003625203215.0765655
CAAAAAT9000.00156619057.97585871
CAAAAAG9700.00326762467.40028141
Produced by FastQC (version 0.11.5)