FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1051473
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGCCT9000.00140156338.0679161
CACAGAT8500.0075519657.68824961
CTTCGAT10400.00577168636.9818511
CCAGCAT12700.00561202556.2891631
CTCAAAA15300.00605073525.69499971
CAAATTT16650.0026145865.64346273
Produced by FastQC (version 0.11.5)