Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005007660 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 528398 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CACACGT | 215 | 2.1279457E-5 | 23.203281 | 7 |
ACACGTC | 230 | 3.58249E-5 | 21.690025 | 8 |
CACGTCT | 250 | 0.0015616715 | 17.104134 | 9 |
GCACACG | 310 | 3.5329725E-4 | 16.092598 | 6 |
GAGCACA | 360 | 6.070258E-5 | 15.853666 | 4 |
AGCACAC | 345 | 7.9664635E-4 | 14.458648 | 5 |
CCTCCAG | 1250 | 0.0051086997 | 6.344775 | 1 |