FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences562589
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGA3808.67363E-515.2050191
CTTCCAT8609.249178E-59.2379321
GTTTCTG8100.00513467478.0248711
CATCGAG8200.00573309567.92700621
CTTCAGC8700.0097362847.4714311
Produced by FastQC (version 0.11.5)