FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449292
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACCC1750.003830400820.5479681
GGCATCC8500.0066501919.059716145
TATATAA8559.541613E-48.3852375
TGAAGGA8500.0084424087.59110454
TAAGTAA3500.00433381655.408164110-114
Produced by FastQC (version 0.11.5)