FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1891764
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGGT2803.0017243E-421.857813145
GGTTGTT14507.875044E-56.88443571
GGTAAAT17351.20654826E-46.1645321
GTCAGCT17257.447881E-45.78691631
GTTGTAA20051.403359E-45.69002151
CCACAAT15200.0068883515.6291911
Produced by FastQC (version 0.11.5)