FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences674176
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTTAGT2900.004133384714.7830756
CTACAAT5952.4688743E-512.047081
ATGTTGC6901.15291456E-410.3552956
TTTTGTT15550.00130608425.98053652
CAAAAAA22151.4627589E-55.8250221
CTTTTTT24758.5677166E-55.2131011
Produced by FastQC (version 0.11.5)