FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5301661
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT13200.016.0338127
ACACGTC18550.011.7898218
CACGTCT19550.010.8258989
GCACACG37500.07.1500216
AGCACAC35850.06.69189075
CGTGTTA10650.0096089626.6242978
AGAGCAC38450.06.60796363
GAGCACA41053.6379788E-125.84480334
CCCAAAC24609.6726464E-55.1755281
GTTTAAT33006.372775E-75.1441611
Produced by FastQC (version 0.11.5)