FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433620
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGGT2202.201104E-523.1004261
CTCCTAT3350.00966052813.0032261
CTCATTA3950.001920953612.8660621
CTCTTCC5400.001659113310.7160163
CTTTGAA8407.0617686E-48.6430171
TCTTCCA10100.00449516077.1616934
Produced by FastQC (version 0.11.5)