FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522631
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAACA3153.321519E-416.2233961
CCCGCCT2850.00318932315.3695341
CTCAAAT4050.002224367312.6181971
CAACAGG4450.004502491611.4839771
CTTCAAA7351.7545423E-49.9326921
CTTCGAT6100.00422561459.5744631
CTCAAAA6750.0097090678.6524781
Produced by FastQC (version 0.11.5)