FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1407515
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCAT4001.440245E-414.3287751
CCAAGAT10206.396679E-47.72630021
TACGCCT8400.0079154157.64831549
CCTTAAG8450.0080801567.6307091
CCTCGAC9800.00369059577.31060031
CTCAAAC11300.00189984896.9741831
CTTGGAA17602.6613052E-66.9201471
CCAGAAT17058.882037E-56.30298041
GGTACAG12600.00617487876.23196137
CTTTTGG18100.00129083175.5415161
AGATTTA18100.00133941855.52536154
ATTAAAA36604.636604E-95.48095271
TAATTAA15750.0099778625.4426694
CAATGAT19700.00373943135.09144261
Produced by FastQC (version 0.11.5)