FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3461067
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCTAGA7300.00438958039.533106145
CTCACAG13900.00259362846.1460981
CCACAGT16554.4750446E-46.02230931
GTTACCC13050.0092946815.991267
GCACACG17550.00593163265.2658846
CCCAATT23202.0322445E-45.2166771
GTTCGCG19150.00284608735.2046591
CCCAACT18100.00836555755.1132591
CCCAAAT28252.739485E-55.0401631
Produced by FastQC (version 0.11.5)