FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497868
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTAGT3250.00822131813.3253399
CCCTTTT5550.001991352810.4841921
CTTCCAT8801.099855E-49.0917611
CTTAAAA6550.007823818.8835531
CCTTCTT9100.00153364787.99275731
CTTTTAC8250.0056814527.93462751
CTTTGAA9400.0021106557.7376691
CAAAAAA15500.006835715.63102631
GGATCGG3150.0087962685.505871330-34
Produced by FastQC (version 0.11.5)