FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1177940
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAC6250.00547089859.2809161
CTCAAAG12658.957923E-57.45132831
TTATGCC11100.00144116787.1585539
GTGGATT10500.0066434476.8814014
CTTATAA17651.2114724E-46.16208121
GTTTCAA17105.370997E-45.93625831
GGTTTTT17350.0041024925.4328131
CTTGTTT19450.00274414485.2190241
TCAAAGA21150.00146304425.1244482
Produced by FastQC (version 0.11.5)