FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1371100
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATAGAC10004.895856E-58.6839741
CCTCAAT11904.2943073E-57.90557861
CCCAAAG10450.00625056966.92501931
CTCCAGA12500.0049299346.36824751
CTTCAAC17501.1071515E-46.20283841
CTTAAAA13050.00771112046.0998541
CTTTGAA19055.4032782E-56.0780221
GATTTGA15450.00109167016.07176265
CTTCAAA21505.028623E-55.7219981
AATTTCC18200.00126365145.55081275
CAAAAAT25651.2984849E-45.0783471
Produced by FastQC (version 0.11.5)