FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2391046
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCAAT9703.791036E-48.1129611
TCGAATT13150.0095736735.97394132
CAAATGT19104.2713352E-45.6184481
CCTCAAT17900.0011430465.595431
TACGGTA17150.0043411235.4074399
CTTCAAA36651.564731E-75.0752541
Produced by FastQC (version 0.11.5)