FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005007748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005007748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences538028
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACATCC5000.00330450111.968805145
CTCAAAG6100.0043965789.5286721
CAAAGAG8950.00131582978.1180031
AAAGAGG10256.277098E-47.73781636
CTTCTGC10950.0094245446.6352631
CTTTTCT13100.00767658846.10089641
Produced by FastQC (version 0.11.5)